遇见数据集

Local Z Projector example dataset and parameters 01

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Zenodo2021-03-20 更新2026-05-25 收录
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Drosophila pupa notum, captured with a laser-scanning confocal microscope (LSM 880, Zeiss). Pixel size 0.188 µm, z step 1 µm. This dataset also contains the parameters to generate the reference surface and local projection, also included. It is meant to be used with the Fiji plugin called 'LocalZProjector': https://gitlab.pasteur.fr/iah-public/localzprojector. The two <em>*.localzprojector </em>files can be loaded directly in the plugin to load adequate parameters. See the accompanying paper: <em>DProj: A toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images.</em> https://www.biorxiv.org/content/10.1101/2021.01.15.426809v2 This is <em>a downsampled version of </em>the dataset used to generate the figures 1, 2 and 3 in this paper, as well as the comparison in table 1.

果蝇蛹胸部背板样本,采用蔡司(Zeiss)LSM 880型激光扫描共聚焦显微镜(laser-scanning confocal microscope)采集。该数据集像素大小为0.188 µm,z轴步长为1 µm。本数据集同时包含用于生成参考表面与局部投影的参数文件,已随数据集一并提供。本数据集需配合名为"LocalZProjector"的Fiji插件使用,插件获取地址为:https://gitlab.pasteur.fr/iah-public/localzprojector。两个后缀为*.localzprojector的文件可直接加载至该插件中,以导入适配的参数。相关研究论文可参考:《DProj:面向大规模三维显微图像的局部二维投影与精准形态计量学工具箱》(DProj: A toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images),论文链接:https://www.biorxiv.org/content/10.1101/2021.01.15.426809v2。本数据集为该论文中用于生成图1、图2、图3以及表1对比内容的原始数据集的降采样版本。

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Zenodo
创建时间:
2021-03-20
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