Dipsacales four locus supermatrix assembled with PyNCBIminer
收藏DataCite Commons2025-04-01 更新2025-04-10 收录
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https://datadryad.org/dataset/doi:10.5061/dryad.xpnvx0kq3
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资源简介:
PyNCBIminer is a user-friendly software that automates the assembly of
large DNA datasets from GenBank for phylogenetic reconstruction using the
supermatrix method.To evaluate the sensitivity of PyNCBIminer to initial
queries, we downloaded four DNA markers (ITS, matK, rbcL and
trnLintron-trnF) of Dipsacales using two distinct initial query sets. The
experiments were performed on a personal computer featuring a 13th Gen
Intel(R) Core (TM) i5-1340P 1.90 GHz processor and 32.0 GB of RAM. Run 1
used six well-aligned sequences from six angiosperm orders as default
initial queries in PyNCBIminer, while Run 2 used six sequences from six
genera within the order Dipsacales.
提供机构:
Dryad
创建时间:
2024-11-29



