Supplementary datasets for "Time non-reversible amino acid substitution models"

Pfam_datasets.zip: Pfam training and test sets. 05_clades.zip: Training and test sets of five clades. non_reversible_matrices.zip: Six time non-reversible matrices for Pfam, Bird, Insect, Mammal, Plant, and Yeast datasets. pca script.zip: an R scrip and matrices to produce the PCA figure ASTRAL trees.zip: the ASTRALREV and ASTRALNEW trees inferred from Bird, Insect, Mammal, Plant, and Yeast datasets.

Pfam_datasets.zip：Pfam的训练集与测试集。
05_clades.zip：五个演化支（clades）的训练集与测试集。
non_reversible_matrices.zip：针对Pfam、鸟类、昆虫、哺乳类、植物及酵母菌数据集的6种时间不可逆置换矩阵。
pca script.zip：用于生成主成分分析（Principal Component Analysis，PCA）图的R脚本与矩阵文件。
ASTRAL trees.zip：基于鸟类、昆虫、哺乳类、植物及酵母菌数据集推断得到的ASTRALREV与ASTRALNEW系统发育树。