Called TAD borders from Hi-C experiments.

NIAID Data Ecosystem2026-05-01 收录

三维基因组结构

TAD边界识别

数据链接：

https://figshare.com/articles/dataset/Called_TAD_borders_from_Hi-C_experiments_/24726619 数据链接链接失效反馈

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资源简介：

NA indicates where a TAD boundary was not called in that cell type. Provided as a separate Excel file. (XLSX)

创建时间：

2023-12-04

Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [RNA-Seq]

植物昼夜节律

三维基因组结构

Genome-wide rhythmic modulation of RNAPII occupancy and histone acetylation modifications are highly coordinated with rhythmic gene expression, and dynamically modulates diurnal 3D genome architecture

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HiChIP: Efficient and sensitive analysis of protein-directed genome architecture

三维基因组结构

染色质构象

Three-dimensional genome structure is central to gene control, but current technologies are often impractical for many biological questions due to cell and read number requirements. Here we present Hi

NIAID Data Ecosystem30

3D genome conformation in Oryza species (Micro-C)

三维基因组结构

水稻属进化

We examined the nature and evolution of three dimensional (3D) genome conformation, including topologically associating domains (TADs), in 5 genomes within the genus Oryza. These included three variet

NIAID Data Ecosystem20

The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [Hi-C]

三维基因组结构

染色质互作

Higher-order chromatin conformation plays critical role in regulating gene expression and biological development, here we show that HNRNPU, a nuclear matrix attachment factor, is a regulator of 3D gen

NIAID Data Ecosystem30

HiC sequencing of Arabidopsis suecica, A. thaliana, A. arenosa and synthetic A. suecica

三维基因组结构

多倍体化效应

Polyploidy is associated with rearrangements and changes to 3D genome structure. Thus we examined Arabidopsis suecica, its ancestral species and synthetic A. suecica

NIAID Data Ecosystem30

Called TAD borders from Hi-C experiments.

资源简介：

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