Genome Assembly and Annotation of Biscutella laevigata subspecies austriaca v1

Genome Assembly and Annotation of Biscutella laevigata subspecies austriaca v1 Description of the data and file structure Genome assembly, gene and TE annotation of Biscutella laevigata subsp. austriaca v1 released along with Beringer and Choudhury et al 2024 MBE, https://doi.org/10.1093/molbev/msae155 Organism = Biscutella laevigata subsp. austriaca NCBI-Taxonomy-ID = 1532295 Assembly-version = v1.0 Annotation-version = v1.0 Files and variables File: Biscutella_laevigata_austriaca_v1.0_TE_annotation.gff Description: Transposable element annotation in GFF3 format with tracks for LTR retrotransposon, DNA transposon, Helitron, LINE, MITEs features. File: Biscutella_laevigata_austriaca_v1.0_filtered_gene_annotation.gff Description: Gene annotation in GFF3 format with tracks for gene, mRNA, exon, CDS, 3'UTR, 5'UTR, and tRNA features. File: Biscutella_laevigata_austriaca_v1.0.fasta Description: Genome assembly in FASTA format with 14 main scaffolds (Scaffold_1, Scaffold_2, Scaffold_3_part1, Scaffold_3_part2, Scaffold_4, Scaffold_5, Scaffold_6, Scaffold_7, Scaffold_8, Scaffold_9, Scaffold_10, Scaffold_11, Scaffold_12, Scaffold_13) that represents the Ba Chromosomes. Access information Other publicly accessible locations of the data: https://genomevolution.org/coge/GenomeInfo.pl?gid=67230. Data was derived from the following sources: PacBio long reads (SRR26423064), Paired-end Illumina short reads (SRX8787129), 10× genomics-linked reads (SRX8815186), Chicago Illumina short reads (SRR26396391), and Hi-C Illumina short reads (SRR26404274). Transcriptomic data: RNA seq among tissues (ERP132985) and RNA seq among environmental treatments (ERP132838)