ViruScopeDB: Curated primer dataset for Ebolavirus
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This dataset contains curated and computationally generated primers for Ebolavirus genomes. The dataset was developed as part of the Master’s thesis project "ViruScopeDB: a comprehensive multi-omics software and database for highly infectious viruses". It integrates oligonucleotide sequences mined from literature (AROLit primers) and in silico generated ones (iSOP primers), validated against a viral genomic alignment. Also included are primer pair suggestions based on a custom scoring model. Data is provided in CSV format with annotations on primer sequence, target region, conservation, and thermodynamic properties. Sheets follow the general logic of All Data > Validated Data > Scored for Conservation Data > Genomic Region Data > Primer Combination Data > Pivot Tables and Graphs.
本数据集收录了经人工整理筛选与计算机模拟生成的埃博拉病毒(Ebolavirus)基因组引物。本数据集源自硕士学位论文课题《ViruScopeDB:面向高传染性病毒的综合多组学软件与数据库》。数据集整合了从文献中挖掘得到的寡核苷酸序列(即AROLit引物,AROLit primers)与虚拟生成的寡核苷酸序列(即iSOP引物,iSOP primers),并基于病毒基因组比对完成了有效性验证。此外还收录了基于自定义评分模型生成的引物对推荐方案。数据集以CSV格式提供,附带引物序列、靶向区域、保守性以及热力学特性等注释信息。各工作表遵循如下通用逻辑:全量数据 > 已验证数据 > 保守性评分数据 > 基因组区域数据 > 引物组合数据 > 数据透视表与图表。



