遇见数据集

Multivariate GWAS for ARD

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Zenodo2025-05-27 更新2026-05-26 收录
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This dataset contains genome-wide summary statistics (autosomal variants) computed from a multivariate genome-wide association study of five age-related diseases (heart attack, high cholesterol, hypertension, stroke, and type 2 diabetes) using Genomic Structural Equation Modeling (https://github.com/GenomicSEM/GenomicSEM). The calculated effective sample size is 475,203. Number of variants: 4,893,454 Column names: SNP = rsID CHR = chromosome BP = base pair location MAF = minor allele frequency A1 = effect allele A2 = other allele est = effect of the SNP on the common factor se_c = standard error of the effect Z_Estimate = est/se_c Pval_Estimate = corresponding P-value of Z_Estimate Q = heterogeneity estimate of the SNP Q_df = degree of freedom for Q Q_pval = P-value associated with the Q statistics

本数据集包含借助基因组结构方程模型(Genomic Structural Equation Modeling,GenomicSEM,https://github.com/GenomicSEM/GenomicSEM),对5种年龄相关疾病(心肌梗死、高胆固醇血症、高血压、脑卒中、2型糖尿病)开展多变量全基因组关联研究后计算得到的全基因组汇总统计量(常染色体变异),其计算所用有效样本量为475203。 变异位点总数:4,893,454 各列字段含义如下: SNP:单核苷酸多态性参考编号(rsID) CHR:染色体编号 BP:碱基对位置 MAF:次要等位基因频率 A1:效应等位基因 A2:其他等位基因 est:单核苷酸多态性对公共因子的效应值 se_c:效应值的标准误 Z_Estimate:效应值与标准误的比值(即est/se_c) Pval_Estimate:Z_Estimate对应的显著性P值 Q:单核苷酸多态性的异质性估计值 Q_df:Q统计量的自由度 Q_pval:Q统计量对应的显著性P值

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Zenodo
创建时间:
2025-05-27
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