Mycoplasma pneumoniae wgMLST schema

This dataset includes the data for the creation of a whole-genome multilocus sequence typing (wgMLST) schema for Mycoplasma pneumoniae. The list of RefSeq accession numbers and the FASTA files for the genome assemblies are included in the "NCBI_assemblies.zip" archive. The "wgMLST_schema.zip" archive includes the wgMLST schema. The genome assemblies were used to create a schema seed with chewBBACA's CreateSchema module. The schema seed, composed of 692 loci, was populated with the alleles found in the genomes used for schema seed creation through allele calling with chewBBACA's AlleleCall module. The final schema is composed of 692 loci and 2336 alleles.本数据集包含用于构建肺炎支原体（Mycoplasma pneumoniae）全基因组多位点序列分型（whole-genome multilocus sequence typing, wgMLST）方案的相关数据。其中，基因组组装所需的RefSeq登录号列表与FASTA格式文件均收录于"NCBI_assemblies.zip"压缩包中，该wgMLST方案本身则存储于"wgMLST_schema.zip"压缩包内。 研究人员借助chewBBACA工具的CreateSchema模块，基于本次提供的基因组组装序列构建了方案种子库。该种子库共包含692个基因座；随后通过chewBBACA的AlleleCall模块执行等位基因调用分析，将构建种子库所用基因组中发现的等位基因填充至该种子库内。最终得到的wgMLST方案共包含692个基因座与2336个等位基因。