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Graph genomes from Talenti et al.: A cattle graph genome incorporating global breed diversity pt.1

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Zenodo2021-12-02 更新2026-05-25 收录
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# Supplementary data for Talenti et al.: A cattle graph genome incorporating global breed diversity (pt.1)<br> This repository contains the first part of the supplementary data for Talenti el al., and provide access to the the following graphs described in the paper:<br> 1. VG1.zip: zipped folder with the linear indexed VG graph generated from the ARS-UCD1.2 genome<br> 2. VG5p.zip: zipped folder with the indexed VG graph generated from the chromosome-wide alignments of five cattle assemblies further expanded with 11M variants from Dutta et al. (2020)<br> 3. BTau_alignment.zip: CACTUS-generated graph alignments of the five cattle genomes

# Talenti等人研究补充数据:纳入全球品种多样性的牛图形基因组(第一部分) 本仓库包含Talenti等人研究补充数据的第一部分,可获取论文中描述的以下图形数据集: 1. VG1.zip:内含基于ARS-UCD1.2基因组构建的线性索引变异图形(Variation Graph, VG)的压缩文件夹 2. VG5p.zip:内含基于5个牛基因组组装的全染色体比对结果构建的索引变异图形,该数据集额外引入了Dutta等人(2020)研究中的1100万个变异位点的压缩文件夹 3. BTau_alignment.zip:由CACTUS工具生成的5个牛基因组的图形比对结果

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2021-12-02
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