Whole-genome Nanopore sequencing for native mtDNA methylation analysis
收藏NIAID Data Ecosystem2026-03-12 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP333847
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We aim to establish and validate a workflow to detect mitochondrial DNA methylation from blood- and iPSC neuron-derived DNA.Therefore blood-derived DNA from five patients with Parkinson's disease and three control subjects was analyzed. As well as DNA from iPSC-derived midbrain neurons from four patients and three controls.To validate the pipeline, fully methylated and unmethylated synthetic DNA was analyzed at different dilution ratios (0%, 50%, 100%). Further, to get a baseline for false-positive methylation calls, two overlapping long-range PCR amplicons of the mtDNA were analyzed as well.
创建时间:
2021-09-18



