Additional file 2 of Hologenome analysis reveals independent evolution to chemosymbiosis by deep-sea bivalves

Additional file 2: Table S1. Constitution of prokaryotes in the gill of C. bisecta based on 16S rDNA amplicon analysis. Table S3. Putative transproter genes in SCbi. Table S4. Genes in biosynthesis pathways of amino acids and cofactors. Table S11. The expansion and contraction events among the three symbiotic bivalves (Conchocele bisecta, Archivesica marissinica, Gigantidas platifrons). Table S12. Counts of pfam domains related to the glycosyl hydrolase families in bivalve genomes. Table S13. Number of Pfam protein families related to the PRRs that involved in bacterial recognition.