design_guided_optE
收藏资源简介:
Code and data associated with the paper "Using experimental results of protein design to guide biomolecular energy-function development" by Haddox et al. See https://github.com/Haddox/design_guided_optE for additional code and data. This repository has two files: rf_model.zip: a directory with code and data for identifying "outlier" designs to experimentally test by deep mutational scanning dualoptE_decoys.zip: a directory with decoys from the interface-prediction benchmark (150 decoys per landscape)
本数据集配套Haddox等人发表的论文《使用蛋白质设计实验结果指导生物分子能量函数开发》(Using experimental results of protein design to guide biomolecular energy-function development),如需获取更多代码与数据,请访问链接https://github.com/Haddox/design_guided_optE。 该代码仓库包含两个文件: rf_model.zip:一个包含代码与数据的目录,用于识别需通过深度突变扫描(deep mutational scanning)开展实验验证的异常设计(outlier); dualoptE_decoys.zip:一个包含界面预测基准测试集诱饵结构(decoys)的目录(每个能量景观对应150个诱饵结构)



