HLDA-ChromBPNet Contribution Scores and BigWigs (Part 3)

Data repository for the Human Lung Development Atlas: Preprint: https://doi.org/10.1101/2025.09.24.678382 Github: https://github.com/GreenleafLab/HLDA This repository contains compressed ChromBPNet predicted sequence to accessibility contribution scores for each cell type. celltype_average_contribution_scores.tar.gz = contains the predicted contribution scores (celltype.h5) and a bigwig for visualization of predicted contribution scores (celltype.bw). Also recommend loading the peaks for each cell type of interest as BED files, available within the Zenodo record for HLDA-ATAC ArchR Projects (Part 1). To visualize the bigwig files for each cell type, please reference the DynSeq page and the WashU Epigenome Browser -DynSeq: https://kundajelab.github.io/dynseq-pages/ -WashU Epigenome Browser: https://epigenomegateway.wustl.edu/browser/人类肺部发育图谱（Human Lung Development Atlas）数据存储库： 预印本：https://doi.org/10.1101/2025.09.24.678382 GitHub仓库：https://github.com/GreenleafLab/HLDA 本存储库收纳了经ChromBPNet预测的、针对每种细胞类型的序列可及性贡献得分压缩文件。 celltype_average_contribution_scores.tar.gz 内含预测贡献得分文件（celltype.h5）以及用于可视化预测贡献得分的bigwig文件（celltype.bw）。此外，建议加载目标研究细胞类型的峰值BED文件，此类文件可在HLDA-ATAC ArchR Projects（第一部分）的Zenodo记录中获取。 若需可视化各细胞类型的bigwig文件，请参考DynSeq页面与WashU表观基因组浏览器（WashU Epigenome Browser）： - DynSeq：https://kundajelab.github.io/dynseq-pages/ - WashU表观基因组浏览器（WashU Epigenome Browser）：https://epigenomegateway.wustl.edu/browser/