Additional file 2: of A frameshift mutation in ARMC3 is associated with a tail stump sperm defect in Swedish Red (Bos taurus) cattle

Sequence variants identified using the SAMtools software package that were compatible with recessive inheritance. Grey background indicates 15 sequence variants that were not polymorphic among 1147 animals of the 1000 bull genomes project. Red color indicates a coding variant compatible with recessive inheritance. The functional consequence of the alternative allele was predicted using the Variant Effect Predictor from Ensembl (see Methods). (XLSX 61Â kb)