Additional file 9 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

Additional file 9 Table S3. Table showing all CNVs detected in the fine-mapped region of association by CNVnator. For every CNV the following information is displayed: sample showing the CNV (Sample); type of CNV (Event); genomic coordinates (Chr:start-stop); length of the CNV (Event Length); CNV normalized read depth (Normalized RD); p-value of the mean normalized read depth value difference from genomic average (p-val1); p-value from probability of read depth values within the region to be in the tails of Gaussian distribution describing frequencies of read depth values in bins (p-val2); same as p-val1, but for the middle of the CNV (p-val3); same as p-val2, but for the middle of the CNV (p-val4); fraction of reads mapped with mapping quality equal to zero (q0).