five

Nucleosome core particle MD simulations

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https://zenodo.org/record/11353258
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资源简介:
Gromacs topology files and xtc trajectory files of nucleosome core particule containing the alpha-palindromic sequence based on the 1KX5 PDB structure with 0.15 M of NaCl salt. Each trajectory is of 1 µs. Force field used: Amber14ff with IDP correction for the histone tails, parmbsc1, TIP3P water model. The letter in the name of the file are associated to a given simulation (1kx5-a_sol.top is related to 1kx5_sol-a.xtc).
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2024-05-27
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