iCLIP seq reveals distribution of genome-wide SR protein-RNA binding

ChEBI2014-11-23 更新2026-07-21 收录

RNA结合蛋白定位

iCLIP-seq数据分析

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https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-63262 数据链接链接失效反馈

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iCLIP seq reveals distribution of genome-wide SR protein-RNA binding

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2014-11-23

iCLIP of HeLa cells with anti-TFIP11 antibody

RNA结合蛋白定位

RNA-蛋白质相互作用

iCLIP of HeLa cells with anti-TFIP11 antibody to investigate RNA binding locations of TFIP11 as part of a larger study on the function of TFIP11. Overall design: iCLIP of HeLa cells with anti-TFIP11 a

NIAID Data Ecosystem90

Transcriptome-wide mapping of MARF1-bound mRNAs. Transcriptome-wide mapping of MARF1-bound mRNAs

RNA结合蛋白定位

转录后调控

To comprehensively identify MARF1-associated mRNAs, we performed iCLIP using engineered HEK293 cells stably expressing a doxycycline (Dox)-inducible FLAG-tagged MARF1 that lacks RNAse activity. Our iC

NIAID Data Ecosystem80

ChIP-seq of TREX complex proteins in HEK293T cells. ChIP-seq of TREX complex proteins in HEK293T cells

转录组调控

RNA结合蛋白定位

During gene expression, RNA export factors are mainly known for driving nucleocytoplasmic transport. While early studies suggested that the Exon Junction Complex (EJC) may provide a binding platform f

NIAID Data Ecosystem60

ENCODE SUNY RNA Binding Protein GeneST Data for HeLaS3

RNA结合蛋白定位

转录后调控

RNA Binding Protein immunoprecipitation study for multiple target proteins in HeLaS3 cell line as part of the ENCODE consortium. Analyzed data tracks available for view on UCSC Genome browser. For d

NIAID Data Ecosystem80

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

RNA结合蛋白定位

转录后调控

Protein-RNA interactions are integral components of nearly every aspect of biology including regulation of gene expression, assembly of cellular architectures, and pathogenesis of human diseases. Howe

NIAID Data Ecosystem70

iCLIP seq reveals distribution of genome-wide SR protein-RNA binding

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