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Biodiversity and ecophysiology of Antarctic sea-ice bacteria

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Research Data Australia2024-12-14 收录
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The data set includes information relevant for the study and description of sea-ice bacteria contains the following dataset subgroups and is organised by REFERENCE number.1) Isolation data: strain designations (e.g. culture collection names are indicated for type cultures); media used for isolation and routine cultivation; temperature used for incubation; any special conditions (e.g. enrichment conditions) used for isolation; isolation site and type (e.g. sea-ice); availability of the indicated strain from the chief investigator (J. Bowman)2) Phenotypic data: Includes morphological, physiological and biochemical tests performed. Details on how these were performed are indicated in the relevant reference.3) Growth/temperature data: data for temperature related growth curves are given where available. Methods are indicated in the associated reference.4) Fatty acid/chemotaxonomy data: fatty acid and other related data are given where available. Methods are indicated in the associated reference.5) Genotypic data: data for DNA-guanosine/cytosine-content and genomic DNA:DNA hybridization are shown where available. Methods are indicated in the associated reference.6) Phylogenetic data: data for sequences are cross-referenced to the GenBank database. In some cases, aligned sequence datasets are available in FASTA format and can be viewed in the programs BIOEDIT (www.mbio.ncsu.edu/BioEdit/bioedit.html) or CLUSTAL W (www.ebi.ac.uk/clustalw).7) Other related published references which are useful or relevant to the dataset e.g. related sequences published subsequent to the ASAC study

本数据集包含用于海冰细菌研究与描述的相关信息,按参考文献编号划分为以下数据集子组:1) 分离数据:菌株命名(模式菌株需标注其保藏库名称)、分离与常规培养所用培养基、培养温度、分离所用特殊条件(如富集培养条件)、分离位点与类型(如海冰)、首席研究员J.鲍曼(J. Bowman)所保藏目标菌株的可获取性;2) 表型数据:涵盖形态学、生理学及生化检测相关内容,检测方法细节详见对应参考文献;3) 生长/温度数据:若有可用数据,将提供与温度相关的生长曲线数据,实验方法详见关联参考文献;4) 脂肪酸/化学分类学数据:若有可用数据,将提供脂肪酸及其他相关数据,实验方法详见关联参考文献;5) 基因型数据:若有可用数据,将提供DNA鸟嘌呤-胞嘧啶(G+C)含量及基因组DNA-DNA杂交相关数据,实验方法详见关联参考文献;6) 系统发育数据:序列数据已交叉引用至GenBank数据库。部分场景下,经比对的序列数据集可采用FASTA格式获取,并可通过BIOEDIT(www.mbio.ncsu.edu/BioEdit/bioedit.html)或CLUSTAL W(www.ebi.ac.uk/clustalw)软件查看;7) 其他与本数据集相关且具有参考价值的已发表文献,例如ASAC研究之后发表的相关序列数据。
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Australian Antarctic Division
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