The number of synonymous and non-synonymous substitutions were calculated using the SNAP website (www.hiv.lanl.gov). The name and position of the seven ORFs in Pac_ICE1 (ICMP18708, NZ), Pac_ICE2 (ICMP
Additional file 17: Table S7. Raw data of Ka/Ks ratio calculation results. The ratio was coloured to show the variation tendency. Source genes are from I. indigotica, and query genes from other Brassi
Upstream open reading frames (uORFs) are translational regulatory elements located in 5′ untranslated regions. They can significantly repress the translation of the downstream coding sequences (CDS),
