five

Amplicon Sequencing Data for Bacteria (16S) and Fungi (ITS) (Raw)

收藏
Figshare2025-10-06 更新2026-04-28 收录
下载链接:
https://figshare.com/articles/dataset/Amplicon_Sequencing_Data_for_Bacteria_16S_and_Fungi_ITS_Raw_/30290302
下载链接
链接失效反馈
官方服务:
资源简介:
Raw sequencing dataset from an experimentally simulated a short-term precipitation pulse (50 mm) in soils from the hyperarid Atacama Desert to evaluate shifts in microbial community composition, diversity, and functional potential, using a microcosm experiment. DNA extraction was performed using the DNeasy® PowerSoil® Pro Kit (Qiagen), following the manufacturer’s protocol, and DNA concentration was determined using a Qubit™ 4.0 fluorimeter (ThermoFisher Scientific). The 16S ribosomal RNA gene, tar-geting the V3-V4 region, and the ITS ribosomal RNA were sequenced at Zymo Research. Primers for sequencing were provided by the same company, and sequencing was performed using the Illumina® MiSeq™ platform. Zymo Research conducted the taxonomic assignment of fungi and bacteria using UCLUST in QIIME v.1.9.1, referencing their proprietary database. The absolute abundance of Amplicon Sequence Variants (ASVs) was determined by Zymo Research using qPCR, with a standard curve for both the 16S and ITS genes.
创建时间:
2025-10-06
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作