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Dendrobium officinale Metagenome

NIAID Data Ecosystem2026-03-10 收录

药用植物内生微生物组

宏基因组物种鉴定

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP052940 数据链接链接失效反馈

官方服务：

资源简介：

Dendrobium officinale is a Chinese herbal medicine, which is living with many endophytic microbes. This project is to obtain the endophytic microbe species in its stem.

应用场景：

创建时间：

2017-09-17

宏基因组物种鉴定

高通量测序数据

Species identified with minimum 50 reads.

NIAID Data Ecosystem70

MetaGenomic Species (MGS:211) from Distal Human Gut Microbiota (MetaHit), Sample MH0055. Phocaeicola plebeius CAG:211

消化道微生物组

宏基因组物种鉴定

Metagenomic data acquired by deep sequencing is immensely complex, lacks apparent structure and is typically dominated by unknown species. Using an abundance co-variance strategy, we group highly co-v

NIAID Data Ecosystem30

mStrain -- Strain-level Identification of Yersinia pestis Using Metagenomic Data

宏基因组物种鉴定

微生物测序验证

sim.fastq, a simulated sequencing data set randomly extracted and mixed after simulated sequencing by Yesinia pestis EV76 and human genome hg38, is used as a data set to validate mStrain.

NIAID Data Ecosystem30

MetaGenomic Species (MGS:977) from Distal Human Gut Microbiota (MetaHit), Sample MH0143. Acetobacter sp. CAG:977

宏基因组物种鉴定

消化道微生物组

NIAID Data Ecosystem60

MetaGenomic Species (MGS:27) from Distal Human Gut Microbiota (MetaHit), Sample V1.UC11-5. [Clostridium] leptum CAG:27 strain:MGS:27

肠道微生物宏基因组

宏基因组物种鉴定

NIAID Data Ecosystem30