Table 4 in A new species of scops-owl (Aves, Strigiformes, Strigidae, Otus) from Principe Island (Gulf of Guinea, Africa) and novel insights into the systematic affinities within Otus
收藏资源简介:
Table 4. List of scops-owls (Otus) samples and GenBank accession numbers for the gene fragments used in this study. Accession numbers in bold indicate sequences newly produced for this study. STP - São Tomé and Príncipe; EG - Equatorial Guinea; DRC - Democratic Republic of the Congo; CHIMERA - sequences for a given taxon obtained from different individuals. TaxonLocality12S16SATP6COICYTBND2ND3KIAAMYO2RAG1SACSTGFB2TTNO. bikegila sp. nov. 1STP: PríncipeOM978880OM978895OM913485OM937282OM937307OM937351ON016156OM937319OM937336ON016107ON016118ON016136ON016141O. bikegila sp. nov. 2STP: PríncipeOM978881OM978896OM913486OM937283OM937308OM937352ON016157--ON016108ON016119ON016137ON016142O. bikegila sp. nov. 3STP: PríncipeOM978882OM978897-OM937284OM937309OM937353ON016158-OM937337ON016109ON016120ON016139ON016143O. bikegila sp. nov. 4STP: PríncipeOM978883OM978898OM913487OM937285OM937310OM937354ON016159OM937320OM937338ON016110ON016121ON016140ON016144O. hartlaubi 1STP: São ToméOM978884OM978899EU601139OM937286EU601108EU601032EU600995OM937321EU601072-ON016122EU600952ON016145O. hartlaubi 2STP: São ToméOM978885OM978900-OM937287OM937303OM937349ON016160OM937322OM937329ON016111ON016123ON016130ON016146O. hartlaubi 3STP: São ToméOM978886OM978901-OM937288OM937304OM937347ON016161OM937323OM937330ON016112ON016124ON016131ON016147O. hartlaubi 4STP: São ToméOM978887OM978902OM913483OM937289OM937305OM937348ON016162OM937324OM937331ON016113ON016125ON016132ON016148O. senegalensis senegalensisSouth Africa--EU601166-EU601127EU601056EU601019-EU601098--EU600976-O. senegalensis feaeEG: AnnobónOM978891OM978908OM913484OM937293OM937306OM937350ON016155OM937327OM937333ON016116ON016128ON016138ON016151O. pembaensis 1Tanzania: Pemba--EU601157-EU601123EU601048EU601010-EU601090--EU600967-O. pembaensis 2Tanzania: Pemba--EU601158-EU601124EU601049EU601011-EU601091--EU600968-O. pamelaeSaudi Arabia-----KC138819KC138827-KC138812----O. scops 1France--EU601146-EU601115EU601039EU601001-EU601079--EU600958-O. scops 2France-OM978906--OM937314-ON016164OM937325OM937334ON016114ON016126ON016135ON016149O. scops 3France-OM978907--OM937313-ON016165OM937326OM937339ON016115ON016127ON016133ON016150O. scops 4FranceOM978890OM978905OM913488OM937292OM937312OM937355ON016163------O. cypriusCyprus---KT803674OM937311--------O. bruceiCHIMERA- United Arab Emirates; Oman----EU348985KC138817KC138825-KC138811EU348920---O. longicornisCHIMERA- Philippines - Isabela, Luzon; UnknownU83751OM978909EU601151OM937294EU601119OM937356EU601005-EU601084--EU600962-O. mirusCHIMERA- Philippines: Mindanao; UnknownU83752---EU601126EU601057EU601020-EU601099--EU600978-O. elegansUnknown---AB842985EU123899--------O. mayottensisMayotte--EU601154-EU601122EU601046EU601008-EU601087--EU600965-O. madagascariensisMadagascarOM978893OM978911OM913489OM937295OM937315OM937357ON016166-EU601082--EU600960-O. rutilusMadagascar--EU601135-EF198270EF198304EU600989-EU601066--EU600946-O. capnodesComoros: Anjouan--EU601145-EU601114EU601038EU601000-EU601078--EU600957-O. insularisSeychelles: Mahe--EU601128-EU601101EU601022EU600983-EU601059--EU600940-O. suniaCHIMERA- China x 2; ThailandOM978894OM978912OM913491ON016106OM937316OM937358ON016167-EU601081EU348927-EU600959-O. socotranusSocotra-----KC138824KC138832-KC138816--KC138810-O. paulianiComoros: Grande Comore----EU601125EU601058EU601021-EU601100--EU600979-O. moheliensisComoros: MoheliOM978892OM978910OM913490-OM937317EU601045ON016168OM937328OM937335ON016117ON016129ON016134ON016152O. icterorhynchus holerythrusCHIMERA- Cameroon: Efulan; DRC: Kivu----OM937318OM937359ON016169------O. icterorhynchus icterorhynchusLiberia: Lofa County-----OM937360ON016170-OM937332----O. bakkamoena marathaeIndia: Wadi-----OM937340-------O. lempijiCHIMERA- Singapore: Indonesia (captive); UnknownOM978888OM978903OM913481OM937290OM937296OM937341ON016153-EU601076EU348922-EU600981-O. lettiaCHIMERA- Russia; China; Laos--EU601140GQ482285EU601109EU601033EU600996-EU601073EU348923-EU600953-O. megalotisCHIMERA- Philippines - Isabela: Luzon--EU601133JQ175645EU601105EU601027EU600988-EU601064--EU600944-O. nigrorumCHIMERA- Philippines: Panay; UnknownU83755---JN131497KF792802---EU348924---O. everettiCHIMERA- Philippines: Mindanao; UnknownU83754--U83779JN131492JN131480-------O. semitorquesCHIMERA- Russia; UnknownAY513588-EU601142AB843645EU601111EU601035EU600998-EU601075--EU600955-O. angelinaeIndonesia: Java-----OM937342-------O. silvicolaIndonesia: Flores----OM937302--------O. spilocephalus vandewateriSumatra----OM937297OM937343-------O. spilocephalus vulpesMalaysia: Perak----OM937298OM937344-------O. spilocephalus luciaeBorneo----OM937299--------O. spilocephalus spilocephalusCHIMERA- China; Unknown--EU601147-EU601116EU601040--EU601080KJ456094-EU600980-O. spilocephalus hambroeckiTaiwan: Horisha----OM937300OM937345-------O. spilocephalus latouchiCHIMERA- Laos; ChinaOM978889OM978904OM913482OM937291OM937301OM937346ON016154--EU348926---O. ireneaeKenya--EU601144-EU601113EU601037EU600999-EU601077--EU600956-Bubo buboFrance--EU601137-AJ003969EU601029EU600992-EU601069--EU600949-Strix alucoFrance--EU601138-EU601107EU601030EU600993-EU601070--EU600950-
表4 本研究使用的角鸮属(Otus)样本及所用基因片段的GenBank(GenBank)登录号列表。粗体标注的登录号代表本研究新生成的序列。STP代表圣多美和普林西比(São Tomé and Príncipe);EG代表赤道几内亚(Equatorial Guinea);DRC代表刚果民主共和国(Democratic Republic of the Congo);CHIMERA指从不同个体获取的同一分类单元的序列。 类群 采样地 12S 16S ATP6 COI CYTB ND2 ND3 KIAA MYO2 RAG1 SACS TGFB2 TTN O. bikegila sp. nov. 1 圣多美和普林西比:普林西比岛 OM978880 OM978895 OM913485 OM937282 OM937307 OM937351 ON016156 OM937319 OM937336 ON016107 ON016118 ON016136 ON016141 O. bikegila sp. nov. 2 圣多美和普林西比:普林西比岛 OM978881 OM978896 OM913486 OM937283 OM937308 OM937352 ON016157 -- ON016108 ON016119 ON016137 ON016142 O. bikegila sp. nov. 3 圣多美和普林西比:普林西比岛 OM978882 OM978897 - OM937284 OM937309 OM937353 ON016158 - OM937337 ON016109 ON016120 ON016139 ON016143 O. bikegila sp. nov. 4 圣多美和普林西比:普林西比岛 OM978883 OM978898 OM913487 OM937285 OM937310 OM937354 ON016159 OM937320 OM937338 ON016110 ON016121 ON016140 ON016144 O. hartlaubi 1 圣多美和普林西比:圣多美岛 OM978884 OM978899 EU601139 OM937286 EU601108 EU601032 EU600995 OM937321 EU601072 - ON016122 EU600952 ON016145 O. hartlaubi 2 圣多美和普林西比:圣多美岛 OM978885 OM978900 - OM937287 OM937303 OM937349 ON016160 OM937322 OM937329 ON016111 ON016123 ON016130 ON016146 O. hartlaubi 3 圣多美和普林西比:圣多美岛 OM978886 OM978901 - OM937288 OM937304 OM937347 ON016161 OM937323 OM937330 ON016112 ON016124 ON016131 ON016147 O. hartlaubi 4 圣多美和普林西比:圣多美岛 OM978887 OM978902 OM913483 OM937289 OM937305 OM937348 ON016162 OM937324 OM937331 ON016113 ON016125 ON016132 ON016148 O. senegalensis senegalensis 南非 -- EU601166 - EU601127 EU601056 EU601019 - EU601098 - - EU600976 - O. senegalensis feae 赤道几内亚:安诺本岛 OM978891 OM978908 OM913484 OM937293 OM937306 OM937350 ON016155 OM937327 OM937333 ON016116 ON016128 ON016138 ON016151 O. pembaensis 1 坦桑尼亚:彭巴岛 -- EU601157 - EU601123 EU601048 EU601010 - EU601090 - - EU600967 - O. pembaensis 2 坦桑尼亚:彭巴岛 -- EU601158 - EU601124 EU601049 EU601011 - EU601091 - - EU600968 - O. pamelae 沙特阿拉伯 ---- KC138819 KC138827 - KC138812 ---- - O. scops 1 法国 -- EU601146 - EU601115 EU601039 EU601001 - EU601079 - - EU600958 - O. scops 2 法国 - OM978906 - OM937314 - ON016164 OM937325 OM937334 ON016114 ON016126 ON016135 ON016149 O. scops 3 法国 - OM978907 - OM937313 - ON016165 OM937326 OM937339 ON016115 ON016127 ON016133 ON016150 O. scops 4 法国 OM978890 OM978905 OM913488 OM937292 OM937312 OM937355 ON016163 ---- - O. cyprius 塞浦路斯 --- KT803674 OM937311 -------- O. brucei 混合样本——阿拉伯联合酋长国;阿曼 ---- EU348985 KC138817 KC138825 - KC138811 EU348920 --- O. longicornis 混合样本——菲律宾吕宋岛伊莎贝拉;未知来源 U83751 OM978909 EU601151 OM937294 EU601119 OM937356 EU601005 - EU601084 - - EU600962 O. mirus 混合样本——菲律宾棉兰老岛;未知来源 U83752 --- EU601126 EU601057 EU601020 - EU601099 - - EU600978 - O. elegans 未知来源 --- AB842985 EU123899 -------- O. mayottensis 马约特岛 -- EU601154 - EU601122 EU601046 EU601008 - EU601087 - - EU600965 O. madagascariensis 马达加斯加 OM978893 OM978911 OM913489 OM937295 OM937315 OM937357 ON016166 - EU601082 - - EU600960 O. rutilus 马达加斯加 -- EU601135 - EF198270 EF198304 EU600989 - EU601066 - - EU600946 O. capnodes 科摩罗:昂儒昂岛 -- EU601145 - EU601114 EU601038 EU601000 - EU601078 - - EU600957 O. insularis 塞舌尔:马埃岛 -- EU601128 - EU601101 EU601022 EU600983 - EU601059 - - EU600940 O. sunia 混合样本——中国2个样本;泰国 OM978894 OM978912 OM913491 ON016106 OM937316 OM937358 ON016167 - EU601081 EU348927 - EU600959 O. socotranus 索科特拉岛 ---- KC138824 KC138832 - KC138816 -- KC138810 O. pauliani 科摩罗:大科摩罗岛 ---- EU601125 EU601058 EU601021 - EU601100 - - EU600979 O. moheliensis 科摩罗:莫埃利岛 OM978892 OM978910 OM913490 - OM937317 EU601045 ON016168 OM937328 OM937335 ON016117 ON016129 ON016134 ON016152 O. icterorhynchus holerythrus 混合样本——喀麦隆埃富兰;刚果民主共和国基伍 ---- OM937318 OM937359 ON016169 ------ O. icterorhynchus icterorhynchus 利比里亚洛法县 ----- OM937360 ON016170 - OM937332 ---- O. bakkamoena marathae 印度瓦迪 ----- OM937340 ------- O. lempiji 混合样本——新加坡:印度尼西亚(圈养);未知来源 OM978888 OM978903 OM913481 OM937290 OM937296 OM937341 ON016153 - EU601076 EU348922 - EU600981 O. lettia 混合样本——俄罗斯;中国;老挝 -- EU601140 GQ482285 EU601109 EU601033 EU600996 - EU601073 EU348923 - EU600953 O. megalotis 混合样本——菲律宾吕宋岛伊莎贝拉 -- EU601133 JQ175645 EU601105 EU601027 EU600988 - EU601064 - - EU600944 O. nigrorum 混合样本——菲律宾班乃岛;未知来源 U83755 --- JN131497 KF792802 --- EU348924 --- O. everetti 混合样本——菲律宾棉兰老岛;未知来源 U83754 -- U83779 JN131492 JN131480 ------- O. semitorques 混合样本——俄罗斯;未知来源 AY513588 - EU601142 AB843645 EU601111 EU601035 EU600998 - EU601075 - - EU600955 O. angelinae 印度尼西亚爪哇岛 ----- OM937342 ------- O. silvicola 印度尼西亚弗洛勒斯岛 ---- OM937302 -------- O. spilocephalus vandewateri 苏门答腊 ---- OM937297 OM937343 ------- O. spilocephalus vulpes 马来西亚霹雳州 ---- OM937298 OM937344 ------- O. spilocephalus luciae 婆罗洲 ---- OM937299 -------- O. spilocephalus spilocephalus 混合样本——中国;未知来源 -- EU601147 - EU601116 EU601040 - EU601080 KJ456094 - EU600980 O. spilocephalus hambroecki 中国台湾:Horisha ---- OM937300 OM937345 ------- O. spilocephalus latouchi 混合样本——老挝;中国 OM978889 OM978904 OM913482 OM937291 OM937301 OM937346 ON016154 - EU348926 --- O. ireneae 肯尼亚 -- EU601144 - EU601113 EU601037 EU600999 - EU601077 - - EU600956 雕鸮(Bubo bubo) 法国 -- EU601137 - AJ003969 EU601029 EU600992 - EU601069 - - EU600949 - 灰林鸮(Strix aluco) 法国 -- EU601138 - EU601107 EU601030 EU600993 - EU601070 - - EU600950 -



