Expression of 97 surface markers and RNA (transcriptome wide) in 13165 cells from a healthy young bone marrow donor

Seurat v3 object<b><br></b><b>ASSAYS</b>:AB: Antibody expression dataRNA: mRNA expression dataBOTH: Concatenated mRNA and antbody expression matrices<br><b>DIMENSIONALITY REDUCTION</b>MOFA: Multi-OMICS factor analysis to integrate AB and RNA data. MOFA served as input for clustering and further dimensionality reduction.MOFAUMAP: UMAP performed on MOFA dimensions. Display used in the manuscript.<br>MOFATSNE: UMAP performed on MOFA dimensions.<b>Projected</b>: Data was projected on the reference dataset MOFAUMAP coordinates<br><b>METADATA</b><b>ct: </b>Projected cell type (cell type labels from the reference dataset are used).Idents(object) uses an unsupervised clustering performed on this dataset.<br>For the reference dataset, see https://doi.org/10.6084/m9.figshare.13397651.v2<br><b>Changelog</b>Compared to the previous version of the file, projected UMAP coordinates and projected cell type labels were added. Also, neighborhood graphs and normalized data are now contained in the object.