pQTL-mapping-rev1

Contains code to replicate genetic mapping and figures for pQTN manuscript (submitted; pre-print on bioRxiv): https://www.biorxiv.org/content/10.1101/2024.10.18.619054v1 plotting_master_script.m will generate the figures in the manuscript. Specify your local code_directory, desired output_directory for the figure files, and download the dependencies and specify the dependency_directory to run the script. Also included are functions and example Snakemake file for pQTN mapping on SWATH-MS data.本数据集包含用于复现pQTN研究手稿（已投稿，预印本已发布于bioRxiv平台）的遗传作图代码与绘图脚本，相关预印本链接如下： https://www.biorxiv.org/content/10.1101/2024.10.18.619054v1 plotting_master_script.m 可生成该手稿中的全部图表。运行该脚本前，请指定本地代码目录、图表文件的目标输出目录，下载所需依赖项并配置依赖目录路径后方可执行。 本数据集还附带用于针对SWATH-MS数据开展pQTN作图的函数文件与示例Snakemake工作流文件。