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Leontodon longirostris genome draft 418Mb

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DataCite Commons2025-05-01 更新2024-07-28 收录
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https://figshare.com/articles/Leontodon_longirostris_genome_draft_418Mb/12706247/3
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<b>1-Leontodon-genome-draft-418Mb.fasta</b>: sequences in FASTA format of the 410,019 scaffolds and contigs that were considered the 418 Mb genome draft for <i>Leontodon longirostris</i>. <br> <b>2-Maker853GeneModels-in1007LongestFragments.gff</b>: the 853 MAKER-based gene models deduced from the 1007 longest (&gt;10 kb) fragments of the 418 Mb genome draft. <br> <b>3-FunctionalAnnot-MakerGeneModels-in1007LongestFragments.tsv</b>: Functional annotation of the predicted 853 proteins deduced from MAKER-based gene models. <br> <b>4-Reconstructed-472ChimaericModels.fasta</b>: sequences in FASTA format of the 472 GeneAssembler-based gene models reconstructed using the short (&lt;10 kb) genome fragments from the 418 Mb genome draft. <br> <b>5-ShortGenomeFragments-in472ChimaericModels.tsv</b>: list of contigs and scaffolds from the 418 Mb genome draft that were used to reconstruct each chimaeric, GeneAssembler-based gene model. <br> <b>6-GeneAssemblerChimaericModels-in472ChimaericModels.gff</b>: annotation of the 472 GeneAssember-based, chimaeric gene models by genome location. <br> <b>7-FunctionalAnnotation472ChimaericModels.xlsx</b>: comprehensive functional annotation of the 472 GeneAssember-based, chimaeric gene models, including the predicted protein length, the number of exons identified in that gene model, a fragmentation index (0-1 range, where 0 means that all exons in the model come from one single sequence contig, and 1 means that each exon comes from a different contig) and the human-readable description of the predicted protein sequence taken from the GFF file.<br>
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创建时间:
2020-08-20
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