Oscillatory dynamics of mRNA metabolism and chromatin accessibility in mESCs during the cell cycle

NIAID Data Ecosystem2026-05-02 收录

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https://zenodo.org/record/10462839

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Processed single-cell RNAseq and multiome sequencing--single-nucleus RNAseq and ATACseq for mESCs Filename Description scrna_deepdycle.h5ad single-cell RNAseq data, has information about unsplcied and spliced levels and the inferred cell cycle phase snrna_deepdycle_rep1.h5ad single-nulceus RNAseq data (replicate 1), has information about unsplcied and spliced levels and the inferred cell cycle phase snrna_deepdycle_rep2.h5ad single-nulceus RNAseq data (replicate 2), has information about unsplcied and spliced levels and the inferred cell cycle phase body_coverage_lif1.tsv.gz single nucleus ATACseq data (replicate 1), counts table of ATACseq peaks mapped to the genes body_coverage_lif2.tsv.gz single nucleus ATACseq data (replicate 2), counts table of ATACseq peaks mapped to the genes model_predictions.zip gene-wise predictions for gene expression--unspliced and spliced, and mRNA metabolism rates--synthesis, splicing, export, and degradation rates for single-cell and single-nucleus data

创建时间：

2024-05-10