遇见数据集

Toward a base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding

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Zenodo2022-08-25 更新2026-05-25 收录
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资源简介:

TF binding models built by JAMS (https://github.com/csglab/JAMS), ChIP-seq peak files (from ENCODE, Najafabadi et al. 2015, Schmitges et al. 2016, and Imbeault et al. 2017; called by MACS 1.4v), ChIP-seq pulldown and control tags from said peaks, input data for JAMS, and RCADE2 motifs for C2H2 zinc finger proteins.

本数据集涵盖由JAMS(https://github.com/csglab/JAMS)构建的转录因子(Transcription Factor,TF)结合模型;来源于ENCODE、Najafabadi等(2015)、Schmitges等(2016)及Imbeault等(2017)的ChIP-seq(染色质免疫共沉淀测序)峰文件(由MACS 1.4v软件鉴定生成);对应上述峰的ChIP-seq下拉标签与对照标签数据;JAMS的输入数据集;以及针对C2H2型锌指蛋白的RCADE2基序。

提供机构:
Zenodo
创建时间:
2022-06-08
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