Dataset generated in "Genomic and ecological evidence shed light on the recent demographic history of two related invasive insects"

Hypogeococcus pungens is a species complex native to southern South America composed of at least five putative species. Two of these undescribed species are invading Central and North America. Hyp-C is a cactophagous mealybug that became an important pest that threatens endemic cactus species in Puerto Rico, and Hyp-AP feeds on Amaranthaceae and Portulacaceae hosts. We used high-throughput sequence data as well as spatial and ecological data to shed light on the history of the introduction of both species in Puerto Rico. In this repository, we include VCF files generated for each species based on different filtering procedures. Spatial data generated in ecological niche modelling analyses, and R code of genetic and ecological analyses as well as demographic models used in Fastsimcoal2 were also included.