MethylDetectR - A Translational Tool for Methylation-Based Health Profiling
收藏资源简介:
This dataset includes reproducible code for the two applications related to the 'MethylDetectR' software. These .R files are included as 'MethylDetectR - Calculate Your Scores.R' and 'MethylDetectR.R'. An example DNAm file and Sexinfo file for upload to 'MethylDetectR - Calculate Your Scores' are included. These are 'DNAm_File_Example.rds' and 'Sexinfo_example.csv', respectively. An example output file from this application/for upload to 'MethylDetectR' is included as 'MethylDetectR - Test For Upload.csv'. An example, optional input file for case/control data is also available as 'MethylDetectR_Case_Control_Example.csv'. Furthermore, a script for the user to generate their own DNAm-based estimated values for human traits is included as 'Script_For_User_To_Generate_Scores.R'. A necessary associated file as 'Predictors_Shiny_By_Groups.csv' is also present for the script to run.
本数据集包含与**MethylDetectR**软件相关的两款应用的可复现代码,对应的R脚本文件为`MethylDetectR - Calculate Your Scores.R`与`MethylDetectR.R`。数据集还提供了可上传至`MethylDetectR - Calculate Your Scores`的示例文件:分别为DNA甲基化(DNA methylation, DNAm)示例文件`DNAm_File_Example.rds`与性别信息示例文件`Sexinfo_example.csv`;同时包含一份该应用的示例输出文件,该文件既可作为该应用的输出示例,也可用于上传至**MethylDetectR**,文件名为`MethylDetectR - Test For Upload.csv`。此外还提供了一份可选的病例-对照数据示例输入文件`MethylDetectR_Case_Control_Example.csv`。数据集还包含一份供用户自行生成人类性状DNA甲基化估算值的脚本,文件名为`Script_For_User_To_Generate_Scores.R`,该脚本运行所需的必需关联辅助文件`Predictors_Shiny_By_Groups.csv`也一并提供。



