TAtouScan HMM database
收藏资源简介:
This repository contains the HMM profiles used by TAtouScan to annotate toxin-antitoxin (TA) systems. TAtouScan is a command-line tool designed to identify TA systems in both genomes and metagenomes. It relies on curated HMM profiles representing known toxin and antitoxin families. The repository includes the following files: tatouscan_hmm_profiles.hmm.gz: A compressed file containing the HMM profiles of toxin-antitoxin protein families. tatouscan_hmm_description.tsv: A TSV file providing metadata for each HMM profile, such as family type, source, and additional annotations.
本仓库包含TAtouScan用于注释毒素-抗毒素(toxin-antitoxin,TA)系统的隐马尔可夫模型(Hidden Markov Model,HMM)轮廓文件。 TAtouScan是一款专为识别基因组与宏基因组中的TA系统而开发的命令行工具,其依托经过人工整理的、代表已知毒素与抗毒素家族的HMM轮廓文件。 本仓库包含以下文件: tatouscan_hmm_profiles.hmm.gz:压缩文件,内含毒素-抗毒素蛋白家族的HMM轮廓文件。 tatouscan_hmm_description.tsv:制表符分隔值(Tab-Separated Values,TSV)文件,可为每个HMM轮廓提供元数据,涵盖家族类型、来源及额外注释信息。



