Software used

NIAID Data Ecosystem2026-05-02 收录

转录组组装

生态指示物种

数据链接：

https://figshare.com/articles/dataset/Software_used/26364340 数据链接链接失效反馈

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资源简介：

Software used in De Novo transcriptome assembly of a Baltic parasitic nematode as ecological indicator for monitoring marine trophic web stability

创建时间：

2024-09-04

Titmice are a better indicator of bird density in Northern European than in Western European forests

生态指示物种

鸟类监测

Population sizes of many birds are declining alarmingly and methods for estimating fluctuations in species’ abundances at a large spatial scale are needed. The possibility to derive indicators from th

NIAID Data Ecosystem70

Taxon-rich multigene phylogenetic analyses resolve the phylogenetic relationship among deep-branching Stramenopiles

系统发育分析

转录组组装

Assembled transcripts of Incisomonas marina, Platysulcus tardus, and Pseudophyllomitus vesiculosus.

NIAID Data Ecosystem60

TraRECo Workshop for SRX062280 (SRR203276)

转录组组装

生物信息学工具

This is a workshop for TraRECo, a de novo transcriptome assembler with read error correction, developed by S. Yoon.The workshop include MATLAB scripts to implement the assembly and configuration file

Figshare2017-11-02 更新40

Simulated data from: Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2

转录组组装

生物信息学

Long-read sequencing technologies have improved significantly since their emergence. Their read lengths, potentially spanning entire transcripts, is advantageous for reconstructing transcriptomes. E

DataCite Commons2025-04-01 更新60

P2.fasta.gz

转录组组装

两栖动物发育

This is a de novo transcriptome assembly of a pool of 3 individual brains of Pre-metamorphic stage of Dryophytes arenicolor.

DataCite Commons2025-03-19 更新50