Proteins encoded by novel isoforms.

Encoded proteins 29 residues or greater from all open reading frames among 12,495 novel isoforms were queried against protein databases. Proteins are grouped according to BLASTp results: no hit (S5A); Plasmodium falciparum protein hit (S5B); protein hit to other taxa (S5C). Query protein information is shown in columns 1–6 with gray headers. The identifier and SQANTI3 classification (S2B Table) of the isoform encoding the protein are shown in columns 1–3. The protein identifier, amino acid sequence, and number of residues are shown in columns 4–6, respectively. Top-ranked BLASTp hit details are shown for searches with the NCBI web application [40] against the non-redundant protein database (columns 7–12 with red headers) and the P. falciparum 3D7 protein database (columns 13–17 with blue headers). Search results with the eggNOG web application [41] are shown in columns 18–33 with purple headers.
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