Additional file 6: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

Table S4. Differentially expressed transcription factors in infected leaf tissue versus mycelium grown in liquid medium. For each differentially expressed transcription factor gene, the table indicates the conserved domains identified using NCBI’s Conserved Domain Database, a summary of blastp results using the NCBI nr protein sequence database, and whether the transcription factor is present in one of the gene clusters that were identified in Additional file 10: Table S7 and [17]. The Table also indicates the JGI gene and protein IDs, the location of the gene on the scaffold, the baseMean value (mean of normalized read counts), the log2 fold change (log2FC), the standard error of the log2 fold change estimate (lfcSE), the Wald statistic (stat), the p-value, and the p-value adjusted for multiple testing (adjusted p-value). Genes with higher expression in medium are colored in blue, and genes with higher expression in infected leaf tissue are colored in green. (XLS 41 kb)