遇见数据集

Pangenomes of multiple species for the "Cluster efficient pangenome graph construction with nf-core/pangenome" manuscript.

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Zenodo2025-01-22 更新2026-05-26 收录
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Pangenomes of multiple species for the "Cluster efficient pangenome graph construction with nf-core/pangenome" manuscript. Each pangenome is represented in a FASTA format file. Each FASTA file was compressed with bgzip and subsequent indices were created with tabix. The name of each file specifies: The species, and the number of haplotypes. The built pangenomes graph are represented in GFA format. Each pangenome graph in the paper is uploaded here, too.

本数据集为《Cluster efficient pangenome graph construction with nf-core/pangenome》论文所用的多物种泛基因组(pangenome)数据集。 每个泛基因组均以FASTA格式(FASTA)文件存储。所有FASTA文件均经bgzip压缩,并通过tabix生成了配套索引文件。 各文件的名称包含以下信息: 物种名称,以及单倍型数目。 本研究构建的泛基因组图以GFA格式存储。本论文中涉及的全部泛基因组图也已上传至本数据集。

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Zenodo
创建时间:
2025-01-22
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