PRJDB7915

config:

[DEFAULT]FastQC Path = /usr2/people/macgregor/fastqc/FastQC/fastqcBLAST Database = /usr2/people/macgregor/mtv_project/references/hrm_workflow/blast/silva_16s/SILVA_16S_dbStandard PCR Primers (CSV) = /usr2/people/macgregor/mtv_project/references/hrm_workflow/standard_pcr_primers.csvClassifier Directory = /usr2/people/macgregor/mtv_project/references/hrm_workflow/classifier/silva-138-99-515-806Datasets (TXT) = /usr2/people/macgregor/mtv_project/references/hrm_workflow/datasets.txtProject Directory = /usr2/people/macgregor/mtv_projectData Directory = /usr2/people/macgregor/mtv_project/dataTarget Subfragment/Region = V4Paired-End Only = TrueDenoising Algorithm = DADA2Chimera Method = consensusTrim Length = 0Min. Sequence Length = 150Truncate Length (F) = 0Truncate Length (R) = 0Classifier = silva-138-99-515-806Classification Method = sklearnRarefication Method = thresholdRarefication Threshold = 90Skip Per-Dataset = FalseSkip Cross-Dataset = FalseSkip Downstream = FalseRerun Per-Dataset = TrueRerun QIIME Per-Dataset = TrueRerun QIIME Cross-Dataset = TrueSave QIIME Intermediates Per-Dataset = TrueClassify Taxonomy Per-Dataset = TrueRarefy Feature Tables Per-Dataset = TrueANCOM-BC Cross-Dataset = FalseNuclear Contamination Status Column = nuclear_contamination_statusDataset Column = dataset_name