mOTUs3 - genome metadata

A tab-delimited file listing genomes used in mOTUs3 with metadata that map each genome to a mOTU and provide additional information such as: the data source, quality metrics and download links. Genome sequence files can be programmatically downloaded with a tool available at: https://github.com/motu-tool/motus_v3_genomes. GENOME Genome name MOTU Assigned mOTU GENOME_SOURCE progenomes2.0 or extension MGS_ADDED Were MGs from this genome added to the database? CHECKM_COMPLETENESS CheckM v1 completeness score CHECKM_CONTAMINATION CheckM v1 contamination score GUNC_PROGENOMES2.1 GUNC result using the progenomes 2.1 database ANVIO_COMPLETENES ANVIO v7.1 completeness score ANVIO_CONTAMINATION ANVIO v7.1 contamination score GTDB-R207 GTDB classification using the database release R207 ENVIRONMENT Source environment of genomes. Retrieved either from progenomes2.0 or from the associated biosample description DOWNLOAD_LINK Link to file containing genomes (one file per mOTU) DOWNLOAD_MD5 MD5 sum of the file ORIGINAL_DOWNLOAD_LINK Link to original genome if available本文件为制表符分隔格式，收录了mOTUs3所使用的基因组，并附带元数据：将每个基因组映射至对应的mOTU，同时提供数据源、质量评估指标、下载链接等附加信息。基因组序列文件可通过下述工具自动化下载：https://github.com/motu-tool/motus_v3_genomes。 GENOME：基因组名称 MOTU：已分配的mOTU GENOME_SOURCE：基因组来源，可为progenomes2.0或扩展集 MGS_ADDED：该基因组的MGs是否已添加至数据库？ CHECKM_COMPLETENESS：CheckM v1完整度评分 CHECKM_CONTAMINATION：CheckM v1污染度评分 GUNC_PROGENOMES2.1：使用progenomes 2.1数据库得到的GUNC分析结果 ANVIO_COMPLETENES：ANVIO v7.1完整度评分 ANVIO_CONTAMINATION：ANVIO v7.1污染度评分 GTDB-R207：基于GTDB数据库R207版本的分类信息 ENVIRONMENT：基因组的来源生境，数据源自progenomes2.0或关联的生物样本描述 DOWNLOAD_LINK：基因组文件下载链接（每个mOTU对应一个文件） DOWNLOAD_MD5：对应基因组文件的MD5哈希校验和 ORIGINAL_DOWNLOAD_LINK：若可用，则提供原始基因组的下载链接