Alvinella pompejana genome and protein data

The genome of the hydrothermal vent annelid Alvinella pompejana

Sami El Hilali, Philippe Dru, Alan Le Moan, Yang I Li, Martijn A. Huynen, André Hoelz, Robert C. Robinson, José M. Martín-Durán, Didier Jollivet, Adam Claridge-Chang, Richard R. Copley

Files relating to the genome sequence of Alvinella pomepejana.

See paper in bioRxiv for full descriptions:

https://doi.org/10.1101/2024.06.25.600561

a_pom_assembly - genomic DNA assembly, all scaffolds

Apom.EVM_gene_models.gff3 - gene models

a_pom_proteins - predicted proteins, one per gene

metagenome_proteins.fasta - binned proteins from assembly of Alvinella Illumina reads (see ms for details)

AP_polymorphism_filtered.recode.vcf.gz - polymorphism data

## 庞贝蠕虫（*Alvinella pompejana*）基因组

作者：Sami El Hilali, Philippe Dru, Alan Le Moan, Yang I Li, Martijn A. Huynen, André Hoelz, Robert C. Robinson, José M. Martín-Durán, Didier Jollivet, Adam Claridge-Chang, Richard R. Copley

本数据集包含与庞贝蠕虫基因组序列相关的各类文件。完整数据集说明详见预印本平台bioRxiv发表的相关论文：https://doi.org/10.1101/2024.06.25.600561

各文件详情如下：
- a_pom_assembly：基因组DNA组装结果，包含全部支架序列（scaffold）
- Apom.EVM_gene_models.gff3：基因模型文件
- a_pom_proteins：预测得到的蛋白质序列，每个基因对应一条蛋白序列
- metagenome_proteins.fasta：基于庞贝蠕虫Illumina测序读段组装结果分箱得到的宏基因组蛋白质序列（详细说明参见论文）
- AP_polymorphism_filtered.recode.vcf.gz：经过滤后的多态性数据文件