Additional file 2: of Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array

List of Gossypium samples genotyped for SNP diversity analyses. The table includes information for seed source, improved/wild classification, assigned categories for improved breeding regions, assigned categories for wild race types, availability of SSR genotypes for SNP-SSR comparison, and values for seed oil, protein, and seed index for samples used in GWAS analysis. In addition, for each sample, the coordinates of the first two MDS dimensions are listed for Figs. 3 and 4a, b. Five samples are included here that were identified as outliers and not used in the SNP analysis. Siokra 104–90 was not a cultivar developed in Australia (I. Wilson, personal communication). It may be a mislabeling of Siokra 1–4/649 which is actually just Siokra 1–4. (XLSX 97 kb)