five

Summary of top patterns identified for the glioblastoma dataset assuming no errors.

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https://figshare.com/articles/dataset/_Summary_of_top_patterns_identified_for_the_glioblastoma_dataset_assuming_no_errors_/976648
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: estimated coverage; : estimated impurity; ME statistic: Vuong statistic comparing the likelihood under the mutual exclusivity model to the likelihood under the independence model; ME p-value: p-value in the ME test (Vuong's test with ME statistic; adjusted using the Benjamini and Hochberg method). Weight: a mutual exclusivity score, applied in previous studies, which increases with coverage and decreases with impurity; Perm. p-value: adjusted p-value in a weight-based column permutation test. Imbalance: contribution of the most frequently mutated gene in the pattern to the coverage.
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2014-03-27
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