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Global Typhoid Genomics Consortium 2022 - Genome Assemblies

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Figshare2023-02-09 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Global_Typhoid_Genomics_Consortium_2022_-_Genome_Assemblies/21431883
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Whole genome assemblies of Salmonella enterica serovar Typhi assembled for the Global Typhoid Genomics Consortium paper: "Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes" (BioRxiv, 2022). Total n=13,000 genomes, each is gzipped fasta format and then grouped into tar balls based on genotype. Genomes are listed in CSV file TGC_data.csv which includes source and quality information, accessions for raw reads, and genome-derived genotype and AMR variables.
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2023-02-09
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