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A Chinese host genetic study discovered IFNs and causality of laboratory traits on COVID-19 severity ,A study of Zhu et al

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Mendeley Data2024-01-31 更新2024-06-26 收录
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Supplementary Tables from the study: one-sample and two-sample Mendelian randomization studies of white blood cell counts (WBC) and low-density lipoprotein cholesterol (LDL-C) on COVID-19 susceptibility and severity with summary statistics obtained from East Asian and European populations, two-sample reverse Mendelian randomization studies with exposure variable as COVID-19 disease and outcome variable as WBC and LDL-C. In details, Table S1. Seven top SNP-trait significant associations and the corresponding one-sample and two-sample MR results with COVID-19 severity obtained from our dataset, related to Figure 4. Table S2. Two-sample MR results with SNP-exposure summary statistics from our dataset and SNP-outcome summary statistics from HGI database, related to Figure 4. Table S3. Two-sample MR results based on one WBC-associated SNP in gene HLA-C from an EAS study and SNP-outcome summary statistics from HGI database, related to Figure 5. Table S4. Summary statistics of a list of WBC-related SNPs in an EAS population and their associations in HGI and the corresponding two-sample MR results, related to Figure 5. Table S5. Two-sample MR results based on one LDL.C-associated SNP in gene ApoE from an EAS study and SNP-outcome summary statistics from HGI database, related to Figure 5. Table S6. Summary statistics of a list of LDL.C-related SNPs in an EAS population and their associations in HGI and the corresponding two-sample MR results, related to Figure 5. Table S7. Two-sample MR results based on one WBC-associated SNP in gene HLA-DPA1/HLA-DPB1 from an EUR study and SNP-outcome summary statistics from HGI database, related to Figure 5. Table S8. Summary statistics of a list of WBC-related SNPs in an EUR population and their associations in HGI and the corresponding two-sample MR results, related to Figure 5. Table S9. Two-sample MR results based on one LDL.C-associated SNP in gene ApoE from an EUR study and SNP-outcome summary statistics from HGI database, related to Figure 5. Table S10. Summary statistics of a list of LDL.C-related SNPs in an EUR population and their associations in HGI and the corresponding two-sample MR results, related to Figure 5. Table S11. Summary statistics of a list of COVID19-related SNPs from the HGI database and their associations with WBC in our dataset and the corresponding two-sample MR results, related to Table 3. Table S12. Summary statistics of a list of COVID19-related SNPs from the HGI database and their associations with LDL-C in our dataset and the corresponding two-sample MR results, related to Table 3. Table S13. Summary statistics of a list of COVID19-related SNPs from the HGI database and their associations with WBC in an UKBB study and the corresponding two-sample MR results, related to Table 3. Table S14. Summary statistics of a list of COVID19-related SNPs from the HGI database and their associations with LDL-C in an UKBB study and the corresponding two-sample MR results, related to Table 3.

本研究的补充表格涵盖两项核心孟德尔随机化(Mendelian randomization, MR)研究相关的汇总统计数据:其一为针对东亚(East Asian, EAS)和欧洲(European, EUR)人群的白细胞计数(white blood cell counts, WBC)与低密度脂蛋白胆固醇(low-density lipoprotein cholesterol, LDL-C)对新冠易感性及重症程度的单样本、双样本MR研究;其二为以新冠疾病为暴露变量、白细胞计数与低密度脂蛋白胆固醇为结局变量的双样本反向MR研究。 具体如下: 表S1:7项顶级SNP(单核苷酸多态性,Single Nucleotide Polymorphism)-表型显著关联结果,以及本数据集来源的与新冠重症相关的单样本、双样本MR分析结果,对应图4。 表S2:基于本数据集的SNP-暴露汇总统计量与HGI数据库的SNP-结局汇总统计量得到的双样本MR分析结果,对应图4。 表S3:基于东亚人群研究中HLA-C基因内1个与白细胞计数相关的SNP,结合HGI数据库的SNP-结局汇总统计量得到的双样本MR分析结果,对应图5。 表S4:东亚人群中一系列与白细胞计数相关的SNP的汇总统计量、它们在HGI数据库中的关联结果,以及对应的双样本MR分析结果,对应图5。 表S5:基于东亚人群研究中ApoE基因内1个与低密度脂蛋白胆固醇相关的SNP,结合HGI数据库的SNP-结局汇总统计量得到的双样本MR分析结果,对应图5。 表S6:东亚人群中一系列与低密度脂蛋白胆固醇相关的SNP的汇总统计量、它们在HGI数据库中的关联结果,以及对应的双样本MR分析结果,对应图5。 表S7:基于欧洲人群研究中HLA-DPA1/HLA-DPB1基因内1个与白细胞计数相关的SNP,结合HGI数据库的SNP-结局汇总统计量得到的双样本MR分析结果,对应图5。 表S8:欧洲人群中一系列与白细胞计数相关的SNP的汇总统计量、它们在HGI数据库中的关联结果,以及对应的双样本MR分析结果,对应图5。 表S9:基于欧洲人群研究中ApoE基因内1个与低密度脂蛋白胆固醇相关的SNP,结合HGI数据库的SNP-结局汇总统计量得到的双样本MR分析结果,对应图5。 表S10:欧洲人群中一系列与低密度脂蛋白胆固醇相关的SNP的汇总统计量、它们在HGI数据库中的关联结果,以及对应的双样本MR分析结果,对应图5。 表S11:从HGI数据库获取的一系列新冠相关SNP的汇总统计量、它们在本数据集中与白细胞计数的关联结果,以及对应的双样本MR分析结果,对应表3。 表S12:从HGI数据库获取的一系列新冠相关SNP的汇总统计量、它们在本数据集中与低密度脂蛋白胆固醇的关联结果,以及对应的双样本MR分析结果,对应表3。 表S13:从HGI数据库获取的一系列新冠相关SNP的汇总统计量、它们在英国生物银行(UK Biobank, UKBB)研究中与白细胞计数的关联结果,以及对应的双样本MR分析结果,对应表3。 表S14:从HGI数据库获取的一系列新冠相关SNP的汇总统计量、它们在英国生物银行研究中与低密度脂蛋白胆固醇的关联结果,以及对应的双样本MR分析结果,对应表3。
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2024-01-31
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