Additional file 1: Table S1. of The genome of newly classified Ochroconis mirabilis: Insights into fungal adaptation to different living conditions

List of genome sequences used in gene families analysis and phylogenomic tree construction. Table S2. Number of CAZyme modules predicted in UM 578 genome. Table S3. Plant cell wall and fungal cell wall degrading and modifying CAZyme families predicted in UM 578. Table S4. Number of peptidases predicted in UM 578. Table S5. Comparison of putative secreted proteases families which had been reported to be expanded in dermatophytes. Table S6. Gene families clusters shared among UM 578 with Trichophyton rubrum and T. verrucosum in this study. Table S7. Predicted lipases in the genomes of UM 578 with skin-inhabiting and non-skin inhabiting fungi. Table S8. Putative biosynthetic pathway genes involved in aflatoxin (AF), sterigmatocystin (ST) and dothistromin (DOT) production predicted in UM 578. Table S9. Putative biosynthetic pathway genes for trichothecene production predicted in UM 578. Table S10. Predicted gene involved in sexual reproduction in UM 578. Table S11. UM 578 specific gene families clusters compared to 16 publicly available fungal genomes. Table S12. Expansion and contraction of Pfam families from CAFE analysis. The P-value for whole family expansion/ contraction is shown as family wide P-value and the node specific for UM 578 is shown (Additional file 2: Figure S15). Only families with family wide P-value â ¤0.01 are shown. (XLS 307 kb)

用于基因家族分析与系统发育树构建的基因组序列列表。
表S2：UM 578基因组中预测的碳水化合物活性酶（Carbohydrate-Active enZYmes，CAZyme）模块数量。
表S3：UM 578中预测的参与植物细胞壁与真菌细胞壁降解、修饰的碳水化合物活性酶家族。
表S4：UM 578基因组中预测的肽酶数量。
表S5：已报道在皮肤癣菌中发生扩增的推定分泌型蛋白酶家族的比较分析。
表S6：本研究中UM 578与红色毛癣菌（Trichophyton rubrum）、疣状毛癣菌（T. verrucosum）共享的基因家族聚类结果。
表S7：UM 578及皮肤栖息、非皮肤栖息真菌的基因组中预测得到的脂肪酶。
表S8：UM 578中预测的参与黄曲霉毒素（aflatoxin，AF）、柄曲霉素（sterigmatocystin，ST）以及多德斯特龙霉素（dothistromin，DOT）生物合成途径的推定基因。
表S9：UM 578中预测的参与单端孢霉烯族毒素生物合成途径的推定基因。
表S10：UM 578中预测的参与有性生殖的基因。
表S11：相较于16个已公开的真菌基因组，UM 578特有的基因家族聚类结果。
表S12：通过基因家族进化分析（CAFE）得到的Pfam家族扩增与收缩情况；家族整体扩增/收缩的P值以家族水平P值表示，同时标注了UM 578节点特异性结果（附加文件2：图S15）。仅展示家族水平P值≤0.01的家族。
（XLS格式，文件大小307 KB）