Cannabis Expression Atlas v1
收藏资源简介:
Overview This directory contains important files created during the construction of the Cannabis Expression Atlas v1. Directory structure Here, you can find the following files: - `parquet_dir.tar.gz`: A partitioned .parquet directory with the gene-level transcript abundances in TPM and bias-corrected counts created with the arrow package. - `se_atlas_gene.rda`: A *SummarizedExperiment* object containing gene-level transcript abundances in TPM and bias-corrected counts, which are stored in the `gene_TPM` and `gene_counts` assays, respectively. - `se_atlas_transcript.rda`: A SummarizedExperiment* object containing transcript-level transcript abundances in TPM and counts, which are stored in the `tx_TPM` and `tx_counts` assays, respectively. The R data files (.rda) can be loaded into an R session using the `load()` function, as it is done for any R data file.



