Replication Data for: Near complete genomes of eight human astroviruses recovered from diarrheal stool samples of hospitalized children in coastal Kenya in 2019

This is a replication dataset for the publication: \"Near complete genomes of eight human astroviruses recovered from diarrheal stool samples of hospitalized children in coastal Kenya in 2019. The dataset is part of long-term surveillance of enteric viruses associated with diarrhea among children under 13 years admitted to the KCH study. This dataset contains results of samples positive for human astrovirus by real-time PCR for the period 13th April 2019-23th July 2019. Aside from the samples tested and results of the tests, it also contains the patients’ sociodemographic characteristic, cycle threshold and symptoms (diarrhoea and Vomiting).The dataset is used to generate new HAstVs genome sequences from RT-PCR positive samples collected from children hospitalized with diarrhea in Kilifi Kenya. The raw sequence data were deposited in the Sequence Read Archive (SRA) under BioProject accession number PRJNA692787 and BioSample accession numbers SAMN17370496 to SAMN17370503. The genome sequences generated here were deposited in GenBank under accession numbers MW485038 to MW485045.

本数据集为下述发表论文的复现数据集：《2019年从肯尼亚沿海地区住院腹泻儿童粪便样本中获取的8株人类星状病毒近乎完整基因组》。本数据集是针对2019年入住KCH研究队列的13岁以下腹泻儿童所开展的肠道病毒相关长期监测项目的组成部分。本数据集涵盖2019年4月13日至2019年7月23日期间，经实时荧光定量PCR（real-time PCR）检测呈人类星状病毒阳性的样本相关结果。除受检样本及检测结果外，数据集还包含患者的社会人口统计学特征、循环阈值以及临床症状（腹泻与呕吐）。本数据集用于从肯尼亚基利菲地区住院腹泻儿童采集的逆转录聚合酶链反应（RT-PCR）阳性样本中获取新型人类星状病毒基因组序列。原始测序数据已提交至序列读取档案（Sequence Read Archive, SRA），对应的生物项目（BioProject）登录号为PRJNA692787，生物样本（BioSample）登录号范围为SAMN17370496至SAMN17370503。本研究生成的基因组序列已提交至GenBank，登录号范围为MW485038至MW485045。