Quantitative predictions of protein interactions with long noncoding RNAs

Long noncoding RNAs (lncRNAs, which comprise 68% of the human transcriptome with average length of 1,000 nt) interact with various RNA-binding proteins (RBPs) to mediate...

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Quantitative predictions of protein interactions with long non-coding RNAs

Computational Approach to define binding sites on lncRNAs validated with eCLIP data Overall design: Using Global Score performances, we investigated protein interactions with Xist lncRNA, the master r

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Quantitative profiling of long noncoding RNAs with targeted RNA sequencing.

We compared the performance of conventional RNAseq with RNA Capture Sequencing (CaptureSeq) to assemble and quantify known RNA spike-Ins and human transcripts. We find CaptureSeq to be superior for th

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