Additional file 2 of Simplitigs as an efficient and scalable representation of de Bruijn graphs
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Additional file 2. Detailed information for the performance comparison. Supplementary Table S7. CPU time and memory consumption (both measured by GNU Time and Snakemake) as a function of species, method, number of threads, and k-mer length, including the used computational node. Supplementary Table S8. Comparison of BCALM versions (CPU time with v2.2.2 vs. v2.2.3). Supplementary Table S9. SLURM resource allocation for ProphAsm and BCALM for the performance evaluation. Supplementary Table S10. Hardware specifications for individual computational nodes.
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2021-04-07



