Strain-specific annotation files for data in File S3 from Linheiro & Bergman 2012
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Data in File S3 from Linheiro & Bergman 2012 are merged across all strains in the DGRP sample. This archive provides bed files with read support in the score field for individual strains. The strain-specific data here are based on the revised dataset from Linheiro & Bergman 2012 posted here: http://dx.doi.org/10.6084/m9.figshare.683836. The union of these strain specific .bed files differs slightly from the merged .bed file corresponding to File S3 (http://dx.doi.org/10.6084/m9.figshare.683836) because of overlapping TE insertions sites. In the merging process, 11 TE insertion sites supported by a total of 37 reads were eliminated.
Linheiro与Bergman 2012年发表的补充材料S3中的数据,为DGRP样本中所有品系的合并数据集。本归档文件提供针对各独立品系的BED(Browser Extensible Data)格式文件,其score字段中记录了对应测序读段的支持信息。本文件中的品系特异性数据集,基于Linheiro与Bergman 2012年修订后的数据集,该数据集已上传至链接:http://dx.doi.org/10.6084/m9.figshare.683836。由于存在重叠的转座子(Transposable Element, TE)插入位点,上述各品系特异性BED文件的合并集合,与对应补充材料S3的合并BED文件(链接:http://dx.doi.org/10.6084/m9.figshare.683836)存在细微差异。在本次合并流程中,共计11个转座子插入位点(总支持读段数为37)被剔除。




