Dataset 7.9 Spleen matrix.isoforms.counts

Dataset 7 contains the raw gene/transcript counts data for each frog tissue sample (Experiment B, n = 61) resulting from allocation of sequence reads to genes from the transcriptome assemblies. These data are contained in Dataset 7, as 12 individual tab-separated text files (.txt) [Data Citation 1]. The four files for each tissue type (skin, liver and spleen) represent raw (1) counts, (2) TMM.EXPR files, (3) TPM.not_cross_norm files, and (4) normalisation information (as per the standard output from RSEM). The first row of these files (1-3 above) represents frog ID, and the first element of all subsequent rows represents transcript/isoform ID.

数据集7包含每只青蛙组织样本（实验B，样本量n=61）的原始基因/转录本计数数据，此类数据由将测序读段比对至转录组组装得到的基因生成。本数据集以12个独立的制表符分隔文本文件（.txt）形式存储上述数据[数据引用1]。针对皮肤、肝脏与脾脏三类组织类型，每类组织对应4个文件：(1)原始计数文件、(2)TMM (Trimmed Mean of M-values).EXPR文件、(3)TPM (Transcripts Per Million).not_cross_norm文件，以及(4)标准化信息文件（遵循RSEM (RNA-Seq by Expectation Maximization) 的标准输出格式）。上述第1至3类文件的第一行为青蛙样本ID，后续所有行的首个元素为转录本/异构体ID。