Haplotype-resolved genome assemblies of Cannabis sativa: Punto Rojo and Cherry Pie
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These sequences are identical to GenBank JBDLLE000000000 (Punto Rojo) and JBDLLD000000000 (Cherry Pie). The sequences are named to comply with the PanSN-spec, i.e., PR:1:chr1 and so on. We use : in place of # to facilitate parsing the GFFs in certain software. The annotation sets include those transferred from cs10 with Liftoff (*-liftoff-wg), predicted resistance genes (*-nlr), predicted terpene synthases (*-tps), LTRs as deduced by EDTA (*-repeats), regions of suspicious coverage as called by Flagger (*-flagger), and high-error regions as estimated by YAK (*-yak-her). Questions are best directed towards the GitHub repository, where one may also find the codebase: https://github.com/COMInterop/PRCP
本序列与GenBank中登录号为JBDLLE000000000(Punto Rojo)及JBDLLD000000000(Cherry Pie)的序列完全一致。 本序列的命名遵循PanSN-spec(泛物种命名规范),即采用PR:1:chr1等格式。我们使用冒号(:)替代井号(#),以方便在部分软件中解析GFF文件。 注释集涵盖以下类别:通过Liftoff工具从cs10基因组转移而来的注释(*-liftoff-wg)、预测抗性基因(*-nlr)、预测萜烯合酶(*-tps)、经EDTA(基因组重复序列注释工具)推导得到的LTR(长末端重复序列)(*-repeats)、经Flagger(覆盖度异常检测工具)判定的覆盖度异常区域(*-flagger),以及经YAK(高错误区域评估工具)估算得到的高错误区域(*-yak-her)。 如有疑问,请优先咨询该GitHub仓库,您亦可在此处获取完整代码库:https://github.com/COMInterop/PRCP



