Sainsc: supporting data
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AnnData file with annotated segmentation-based cells from Xenium Brain slices. The cell annotation is used to generate the cell-type signatures and compare the cell-type assignment of Sainsc on the Xenium brain dataset (see Müller-Bötticher et al. 2024) and is necessary to reproduce the results of the study. The data was generated as part of Salas et al. 2023. The annotation is based on the Xenium cell segmentation. Processing and annotation was performed using scanpy. For details please refer to the publication.
本数据集为包含Xenium脑切片来源的经注释分割细胞的AnnData文件。 该细胞注释可用于生成细胞类型特征,并对比Sainsc在该Xenium脑数据集上的细胞类型分配结果(详见Müller-Bötticher等人2024年的研究),同时是复现该研究结果的必要条件。 本数据集生成自Salas等人2023年的研究工作。该注释基于Xenium平台的细胞分割结果,数据处理与注释流程均通过Scanpy完成。如需了解更多细节,请参阅相关发表文献。
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Zenodo创建时间:
2024-11-13



